edgeR Job

Biotechvana

Hi,Ahmed (and everyone)

I was finishing my work with Corste-EdgeR that we talk about some days ago,
but I am not succeeding in the last analysis.

I am using the very same file that Corset provides (and also some tunned files
in csv or txt, please find them attached). I think they are in the right
format, but EdgeR does not provide data and the error file says:

[1] "After finishing the result will be stored in :
/omica/ricardo_data/RosaHermosa_smallRNAs/07b2-edgeR_CWS_COI-240219″
Error in library(edgeR) : there is no package called a€˜edgeRa€™
Calls: suppressMessages -> withCallingHandlers -> library
EjecuciÃ³n interrumpida

Since the message says that there is not an edgeR package, I wonder if it is
something related to the program version, something lacking in the new server
or something similar.

Could you please have a look?

Many Thanks!

Ricardo

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Ricardo Ramos Ruiz

Unidad de Genomica Parque Cientifico de Madrid

C/ Faraday 7. 28049 MADRID

[ricardo.ramos@fpcm.es](mailto:ricardo.ramos@fpcm.es)

Telefono 672 171 500

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Attachments

Biotechvana

Hi Ricardo,

Yes, you are right, the library is missing, We have installed it.

Now you can try again, just remember to select the appropriate csv separator
for your input file (because some files have tab and others have semicolon ).

Let me know if you have any problems.

Best regards,

Ahmed

Ahmed Hafez, PhD
Chief Information Officer (CIO), Biotechvana S.L.

Parc Cientific Universitat de Valencia
Carrer del Catedratic Agustin Escardino, 9.

46980 Paterna, Valencia. Spain

Phone: +34 960 06 74 93

[ahmed.hafez@biotechvana.com](mailto:ahmed.hafez@biotechvana.com)
[ah.hafez@gmal.com](mailto:ah.hafez@gmal.com)

Faculty of Computers and Information,
Minia University, Egypt.

De acuerdo con el Reglamento (UE) 2016/679 del Parlamento Europeo y del
Consejo, de 27 de abril de 2016, relativo a la proteccion de las personas
fisicas en lo que respecta al tratamiento de datos personales y a la libre
circulacion de estos datos podra revocar el consentimiento prestado y ejercer
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